The standard Morgan was released with 3mm filament and 8mm rod.
1.75mm filament has become a more viable option in South Africa, because of the choices made by commercial 3D printer manufacturers, and therefore Morgan followed suite with an option to use 1.75mm. I have converted all my machines to the new extruder, and am happy with the performance so far.
12mm rod was added with the advent of the laser cut aluminium platforms. It assumes the use of long 12mm lm12uu bearings, and has good mechanical properties and smoother movement, and the expense of, well, expense.
That said, all of my current machines runs 8mm, and I do get satisfactory results.